Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bxe_A0914 | Bxe_A4128 | Bxe_A0914 | Bxe_A4128 | DNA polymerase III, epsilon subunit. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.515 |
| Bxe_A0914 | Bxe_B0141 | Bxe_A0914 | Bxe_B0141 | DNA polymerase III, epsilon subunit. | DEAD/DEAH box helicase. | 0.824 |
| Bxe_A0914 | Bxe_B0778 | Bxe_A0914 | Bxe_B0778 | DNA polymerase III, epsilon subunit. | Putative DEAD/DEAH box helicase. | 0.824 |
| Bxe_A0914 | Bxe_B1153 | Bxe_A0914 | Bxe_B1153 | DNA polymerase III, epsilon subunit. | ATP dependent helicase, Lhr family. | 0.824 |
| Bxe_A0914 | coaE | Bxe_A0914 | Bxe_A0501 | DNA polymerase III, epsilon subunit. | Dephospho-CoA kinase, CoaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.615 |
| Bxe_A0914 | mutM | Bxe_A0914 | Bxe_A4129 | DNA polymerase III, epsilon subunit. | Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.944 |
| Bxe_A0914 | nth | Bxe_A0914 | Bxe_A3311 | DNA polymerase III, epsilon subunit. | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.525 |
| Bxe_A0914 | polA | Bxe_A0914 | Bxe_B2834 | DNA polymerase III, epsilon subunit. | DNA polymerase A; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.821 |
| Bxe_A0914 | uvrC | Bxe_A0914 | Bxe_A1095 | DNA polymerase III, epsilon subunit. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.605 |
| Bxe_A4128 | Bxe_A0914 | Bxe_A4128 | Bxe_A0914 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III, epsilon subunit. | 0.515 |
| Bxe_A4128 | Bxe_A4130 | Bxe_A4128 | Bxe_A4130 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative membrane protein. | 0.596 |
| Bxe_A4128 | mutM | Bxe_A4128 | Bxe_A4129 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.900 |
| Bxe_A4128 | nth | Bxe_A4128 | Bxe_A3311 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.736 |
| Bxe_A4128 | polA | Bxe_A4128 | Bxe_B2834 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase A; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.416 |
| Bxe_A4128 | uvrC | Bxe_A4128 | Bxe_A1095 | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.408 |
| Bxe_A4130 | Bxe_A4128 | Bxe_A4130 | Bxe_A4128 | Putative membrane protein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.596 |
| Bxe_A4130 | mutM | Bxe_A4130 | Bxe_A4129 | Putative membrane protein. | Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.651 |
| Bxe_B0141 | Bxe_A0914 | Bxe_B0141 | Bxe_A0914 | DEAD/DEAH box helicase. | DNA polymerase III, epsilon subunit. | 0.824 |
| Bxe_B0141 | mutM | Bxe_B0141 | Bxe_A4129 | DEAD/DEAH box helicase. | Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.769 |
| Bxe_B0141 | uvrC | Bxe_B0141 | Bxe_A1095 | DEAD/DEAH box helicase. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.514 |
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