STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B0980Putative gamma-carboxymuconolactone decarboxylase subunit. (262 aa)    
Predicted Functional Partners:
Bxe_B0979
Conserved hypothetical protein with cupin domain.
 
  
 0.773
Bxe_B0978
Putative 3-hydroxyisobutyrate dehydrogenase.
 
  0.748
Bxe_B0977
Major facilitator superfamily (MFS)metabolite/H+ symporter.
 
    0.704
Bxe_A2781
4-cresol dehydrogenase (hydroxylating).
  
     0.674
Bxe_B2713
Hypothetical protein.
  
     0.664
Bxe_B0976
Putative gamma carboxymuconolactone decarboxylase.
 
     0.655
clcE
Maleylacetate reductase.
 
  
  0.643
Bxe_B0801
Putative isoflavone oxidoreductase.
  
     0.638
Bxe_C0965
Conserved hypothetical protein.
 
  
 0.634
Bxe_A1772
Putative esterase.
  
     0.629
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.