Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A1391 | Bxe_A2274 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 0.972 |
Bxe_A1391 | Bxe_A4037 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.943 |
Bxe_A1391 | Bxe_B1435 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Electron transfer flavoprotein fixB (alpha subunit). | 0.722 |
Bxe_A1391 | Bxe_B1436 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Electron transfer flavoprotein, fix A (beta subunit). | 0.661 |
Bxe_A1391 | Bxe_B1580 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative electron transfer flavoprotein alpha- subunit. | 0.722 |
Bxe_A1391 | Bxe_B1901 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative acyl-CoA dehydrogenase. | 0.813 |
Bxe_A1391 | Bxe_C0251 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Electron transfer flavoprotein, alpha subunit, EtfA. | 0.722 |
Bxe_A1391 | Bxe_C0280 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.859 |
Bxe_A1391 | Bxe_C0701 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative acyl-CoA dehydrogenase. | 0.813 |
Bxe_A2274 | Bxe_A1391 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.972 |
Bxe_A2274 | Bxe_A4037 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.943 |
Bxe_A2274 | Bxe_B1435 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Electron transfer flavoprotein fixB (alpha subunit). | 0.722 |
Bxe_A2274 | Bxe_B1436 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Electron transfer flavoprotein, fix A (beta subunit). | 0.661 |
Bxe_A2274 | Bxe_B1580 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Putative electron transfer flavoprotein alpha- subunit. | 0.722 |
Bxe_A2274 | Bxe_B1901 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.813 |
Bxe_A2274 | Bxe_C0251 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit, EtfA. | 0.722 |
Bxe_A2274 | Bxe_C0280 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.841 |
Bxe_A2274 | Bxe_C0701 | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.813 |
Bxe_A4037 | Bxe_A1391 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.943 |
Bxe_A4037 | Bxe_A2274 | 3-hydroxyacyl-CoA dehydrogenase. | Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. | 0.943 |
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