STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_B2092Conserved hypothetical protein. (127 aa)    
Predicted Functional Partners:
Bxe_B1094
Conserved hypothetical protein.
  
     0.607
Bxe_A0774
Hypothetical protein.
  
     0.602
Bxe_B2987
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
     0.602
Bxe_B2382
Cyclic nucleotide-regulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase.
  
     0.594
glgC
Putative glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
   0.575
Bxe_C1382
Conserved hypothetical protein.
  
  
  0.546
Bxe_B0903
Thioredoxin reductase.
  
     0.545
Bxe_A2457
Predicted transmembrane Transcriptional regulator (anti-sigma factor).
  
     0.539
Bxe_B2162
Conserved hypothetical protein.
  
  
  0.532
Bxe_B2086
Hypothetical protein.
 
     0.518
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.