Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bxe_A0119 | Bxe_A0120 | Bxe_A0119 | Bxe_A0120 | CheA Signal Transduction Histidine Kinases(STHK). | CheW protein. | 0.999 |
Bxe_A0119 | Bxe_A0122 | Bxe_A0119 | Bxe_A0122 | CheA Signal Transduction Histidine Kinases(STHK). | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.986 |
Bxe_A0119 | Bxe_A3018 | Bxe_A0119 | Bxe_A3018 | CheA Signal Transduction Histidine Kinases(STHK). | CheW protein. | 0.999 |
Bxe_A0119 | Bxe_B0221 | Bxe_A0119 | Bxe_B0221 | CheA Signal Transduction Histidine Kinases(STHK). | GAF sensor hybrid histidine kinase. | 0.999 |
Bxe_A0119 | Bxe_B1218 | Bxe_A0119 | Bxe_B1218 | CheA Signal Transduction Histidine Kinases(STHK). | CheB methylesterase. | 0.999 |
Bxe_A0119 | Bxe_B1520 | Bxe_A0119 | Bxe_B1520 | CheA Signal Transduction Histidine Kinases(STHK). | Signal transduction histidine kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
Bxe_A0119 | Bxe_B3011 | Bxe_A0119 | Bxe_B3011 | CheA Signal Transduction Histidine Kinases(STHK). | CheA signal transduction histidine kinases (STHK). | 0.942 |
Bxe_A0119 | Bxe_C0009 | Bxe_A0119 | Bxe_C0009 | CheA Signal Transduction Histidine Kinases(STHK). | Methyl-accepting chemotaxis sensory transducer. | 0.990 |
Bxe_A0119 | Bxe_C0521 | Bxe_A0119 | Bxe_C0521 | CheA Signal Transduction Histidine Kinases(STHK). | Multi sensor hybrid histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
Bxe_A0119 | cheB | Bxe_A0119 | Bxe_A0124 | CheA Signal Transduction Histidine Kinases(STHK). | Two component CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
Bxe_A0120 | Bxe_A0119 | Bxe_A0120 | Bxe_A0119 | CheW protein. | CheA Signal Transduction Histidine Kinases(STHK). | 0.999 |
Bxe_A0120 | Bxe_A0122 | Bxe_A0120 | Bxe_A0122 | CheW protein. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.988 |
Bxe_A0120 | Bxe_A3018 | Bxe_A0120 | Bxe_A3018 | CheW protein. | CheW protein. | 0.985 |
Bxe_A0120 | Bxe_B0221 | Bxe_A0120 | Bxe_B0221 | CheW protein. | GAF sensor hybrid histidine kinase. | 0.991 |
Bxe_A0120 | Bxe_B1218 | Bxe_A0120 | Bxe_B1218 | CheW protein. | CheB methylesterase. | 0.996 |
Bxe_A0120 | Bxe_B1520 | Bxe_A0120 | Bxe_B1520 | CheW protein. | Signal transduction histidine kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
Bxe_A0120 | Bxe_B3011 | Bxe_A0120 | Bxe_B3011 | CheW protein. | CheA signal transduction histidine kinases (STHK). | 0.999 |
Bxe_A0120 | Bxe_C0009 | Bxe_A0120 | Bxe_C0009 | CheW protein. | Methyl-accepting chemotaxis sensory transducer. | 0.989 |
Bxe_A0120 | Bxe_C0521 | Bxe_A0120 | Bxe_C0521 | CheW protein. | Multi sensor hybrid histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
Bxe_A0120 | cheB | Bxe_A0120 | Bxe_A0124 | CheW protein. | Two component CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
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