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lcdH protein (Mesorhizobium loti MAFF303099) - STRING interaction network
"lcdH" - L-carnitine dehydrogenase in Mesorhizobium loti MAFF303099
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lcdHL-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-dehydrocarnitine (364 aa)    
Predicted Functional Partners:
mlr5044
annotation not available (275 aa)
 
  0.984
mlr5039
annotation not available (303 aa)
 
   
  0.964
mlr3847
annotation not available (392 aa)
 
  0.962
mlr5042
annotation not available (387 aa)
 
   
  0.962
mll4180
annotation not available (401 aa)
 
  0.959
mlr5628
annotation not available (402 aa)
 
  0.958
mlr7614
annotation not available (392 aa)
   
  0.951
mlr1489
annotation not available (159 aa)
        0.946
mll6870
annotation not available (195 aa)
 
  0.942
mlr6976
annotation not available (268 aa)
 
  0.936
Your Current Organism:
Mesorhizobium loti MAFF303099
NCBI taxonomy Id: 266835
Other names: M. loti MAFF303099, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099
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