STRINGSTRING
mll0036 protein (Mesorhizobium loti) - STRING interaction network
"mll0036" - Isocitrate dehydrogenase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0036Isocitrate dehydrogenase (403 aa)    
Predicted Functional Partners:
mll3030
Glutamate synthase (1581 aa)
   
 
  0.987
mlr4335
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (896 aa)
   
  0.987
mll4301
2-oxoglutarate dehydrogenase E1 (995 aa)
     
 
  0.983
mll3029
Glutamate synthase (484 aa)
     
 
  0.938
mll4104
Hypothetical protein (1612 aa)
   
 
    0.897
mlr5883
Aspartate transaminase (396 aa)
   
 
  0.847
mlr2541
Aspartate aminotransferase (400 aa)
   
 
  0.847
mlr6098
Aldehyde dehydrogenase (481 aa)
   
 
  0.841
mll7043
Succinate-semialdehyde dehydrogenase (485 aa)
   
 
  0.841
mll5809
Succinate-semialdehyde dehydrogenase (497 aa)
   
 
  0.841
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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