STRINGSTRING
mll0059 protein (Mesorhizobium loti) - STRING interaction network
"mll0059" - Transcriptional regulator in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0059Transcriptional regulator (470 aa)    
Predicted Functional Partners:
msr0060
Hypothetical protein (83 aa)
              0.642
mll0178
Hypothetical protein (276 aa)
   
          0.557
mll6838
Hypothetical protein (1826 aa)
     
      0.499
dapB2
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (264 aa)
     
      0.482
dapB1
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (273 aa)
     
      0.482
mlr4132
Pyridoxamine kinase (294 aa)
 
        0.480
mlr7635
Aminotransferase (292 aa)
   
 
  0.476
mlr3007
Hypothetical protein (220 aa)
   
 
  0.476
mlr1594
Branched-chain amino acid transferase (320 aa)
   
 
  0.476
mlr0401
D-amino acid aminotransferase (287 aa)
   
 
  0.476
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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