STRINGSTRING
mll0085 protein (Mesorhizobium loti) - STRING interaction network
"mll0085" - Hypothetical protein in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0085Hypothetical protein (341 aa)    
Predicted Functional Partners:
mll0086
Amino acid binding protein (355 aa)
 
          0.885
mlr0087
Monooxygenase (175 aa)
              0.597
mlr0089
Hypothetical protein (421 aa)
              0.592
mlr0088
Hypothetical protein (309 aa)
              0.585
mlr0092
Hypothetical protein (245 aa)
              0.482
mlr0091
Hypothetical protein (112 aa)
              0.481
mlr1187
Peptide ABC transporter permease (315 aa)
 
        0.431
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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