STRINGSTRING
mll0208 protein (Mesorhizobium loti) - STRING interaction network
"mll0208" - Hypothetical protein in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0208Hypothetical protein (266 aa)    
Predicted Functional Partners:
mll0209
Hypothetical protein (484 aa)
 
          0.802
mll7509
Hypothetical protein (268 aa)
 
   
  0.767
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (144 aa)
   
        0.672
mlr0210
Aminotransferase (382 aa)
              0.652
mll0206
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit (152 aa)
              0.643
mll0203
acetyl-CoA carboxylase biotin carboxylase subunit (447 aa)
              0.637
mlr7525
Hypothetical protein (250 aa)
 
     
  0.547
mlr3476
Hypothetical protein (172 aa)
 
   
  0.526
aat
leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine (205 aa)
              0.517
glsA
Glutaminase (315 aa)
              0.500
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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