STRINGSTRING
mll0238 protein (Mesorhizobium loti) - STRING interaction network
"mll0238" - Transcriptional regulator in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0238Transcriptional regulator (298 aa)    
Predicted Functional Partners:
mlr0239
Hypothetical protein (292 aa)
 
          0.917
mll3280
Hypothetical protein (988 aa)
   
 
  0.634
mlr1441
AmpR (295 aa)
   
          0.632
mll8279
Transcriptional regulator (300 aa)
   
          0.613
mlr6097
Nitrogen assimilation control protein (316 aa)
   
     
  0.572
mlr0241
Hypothetical protein (209 aa)
   
        0.562
mlr0240
Esterase (316 aa)
              0.550
mll2048
Transcriptional regulator (329 aa)
   
   
  0.547
mll2420
Transcriptional regulator (318 aa)
   
          0.528
mll0129
AmpR (303 aa)
   
     
  0.522
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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