STRINGSTRING
mll0250 protein (Mesorhizobium loti) - STRING interaction network
"mll0250" - Transcriptional regulator in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0250Transcriptional regulator (273 aa)    
Predicted Functional Partners:
mll3795
Transcriptional regulator (262 aa)
   
          0.767
mlr4743
2-dehydro-3-deoxy-6-phosphogalactonate aldolase (212 aa)
 
     
  0.580
mlr0251
Glyoxylate carboligase (593 aa)
              0.559
mll0249
Hypothetical protein (136 aa)
              0.548
mlr3330
Dehydratase (501 aa)
 
   
  0.540
mlr0252
Hypothetical protein; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (265 aa)
              0.528
mll6782
Transcriptional regulator (224 aa)
 
   
  0.499
mll7354
Transcriptonal regulator (230 aa)
   
          0.475
mlr2994
Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (216 aa)
 
     
  0.451
mlr4749
Transcriptional regulator (248 aa)
 
   
  0.450
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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