STRINGSTRING
mll0412 protein (Mesorhizobium loti) - STRING interaction network
"mll0412" - Agmatinase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0412Agmatinase (310 aa)    
Predicted Functional Partners:
mlr5987
Aminotransferase (458 aa)
   
  0.976
mll2974
Ornithine decarboxylase (377 aa)
   
 
  0.962
mll1584
Ornithine decarboxylase (406 aa)
   
 
  0.962
mll1207
Aminotransferase (459 aa)
   
 
    0.904
mlr1969
Spermidine acetyltransferase (141 aa)
         
    0.900
mll8453
Agmatinase (335 aa)
   
   
 
0.857
mlr4895
Agmatinase (331 aa)
   
   
 
0.856
mll3030
Glutamate synthase (1581 aa)
           
  0.811
mlr6963
Hypothetical protein (466 aa)
   
  0.770
mlr5990
Hypothetical protein (440 aa)
   
  0.770
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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