STRINGSTRING
mll0487 protein (Mesorhizobium loti) - STRING interaction network
"mll0487" - Prophage integrase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0487Prophage integrase (402 aa)    
Predicted Functional Partners:
mll3280
Hypothetical protein (988 aa)
         
  0.804
msl6419
Symbiosis island integrase (82 aa)
   
          0.778
mlr0958
Integrase (417 aa)
   
          0.564
mll0486
Hypothetical protein (76 aa)
         
  0.518
mll0485
Hypothetical protein (780 aa)
              0.511
hisS
histidyl-tRNA synthetase (500 aa)
     
      0.493
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (520 aa)
         
  0.436
mlr7968
Hypothetical protein (234 aa)
     
   
  0.419
dnaA
DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (514 aa)
     
   
  0.419
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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