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mll0534 protein (Mesorhizobium loti) - STRING interaction network
"mll0534" - Short-chain dehydrogenase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0534Short-chain dehydrogenase (248 aa)    
Predicted Functional Partners:
mlr0535
Transcriptional regulator (204 aa)
 
          0.861
mll4199
enoyl-CoA hydratase (689 aa)
   
  0.853
mll6752
CDA peptide synthetase III (923 aa)
   
 
  0.834
mll6746
Pristinamycin I synthase 3 (917 aa)
   
 
  0.834
mlr5880
Hypothetical protein (192 aa)
 
          0.751
mll7159
Acyl dehydratase MaoC (166 aa)
 
  0.706
mlr3097
Nodulation protein NodN (161 aa)
   
  0.660
mlr2699
Hypothetical protein (156 aa)
   
  0.660
mlr2698
Hypothetical protein (156 aa)
   
  0.660
mlr0905
Monoamine oxidase regulatory protein (150 aa)
   
  0.660
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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