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mll0800 protein (Mesorhizobium loti) - STRING interaction network
"mll0800" - ABC transporter ATP-binding protein in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0800ABC transporter ATP-binding protein (269 aa)    
Predicted Functional Partners:
mll0801
ABC transporter permease (395 aa)
 
 
  0.998
mll0798
Hypothetical protein (457 aa)
 
  0.997
mll0797
Hypothetical protein (197 aa)
 
        0.925
mlr0803
Muconate cycloisomerase (327 aa)
   
        0.707
mll3023
Hypothetical protein (333 aa)
   
        0.483
surE
SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (252 aa)
 
        0.441
mll3197
ABC transporter ATP-binding protein (in rpoN upstream) (272 aa)
 
       
0.428
mll7836
DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins (487 aa)
   
        0.428
mll5254
ABC transporter ATP-binding protein (613 aa)
 
          0.419
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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