STRINGSTRING
mll0801 protein (Mesorhizobium loti) - STRING interaction network
"mll0801" - ABC transporter permease in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0801ABC transporter permease (395 aa)    
Predicted Functional Partners:
mll0800
ABC transporter ATP-binding protein (269 aa)
 
 
  0.998
mll0798
Hypothetical protein (457 aa)
 
  0.997
mll0797
Hypothetical protein (197 aa)
 
        0.922
mlr0803
Muconate cycloisomerase (327 aa)
              0.713
bamA
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (794 aa)
 
        0.575
mll3023
Hypothetical protein (333 aa)
 
        0.559
mll3197
ABC transporter ATP-binding protein (in rpoN upstream) (272 aa)
 
          0.519
mll3198
Hypothetical protein (199 aa)
 
          0.484
surE
SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (252 aa)
 
        0.457
murA2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (418 aa)
   
        0.438
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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