STRINGSTRING
mll0920 protein (Mesorhizobium loti) - STRING interaction network
"mll0920" - Hypothetical protein in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0920Hypothetical protein (148 aa)    
Predicted Functional Partners:
mlr0015
NifS (387 aa)
   
  0.966
mll5865
NifS (418 aa)
   
  0.966
mll1571
DnaJ-like protein (239 aa)
   
 
  0.940
msl0793
Ferredoxin (106 aa)
   
  0.862
mlr0021
nifS-like aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (413 aa)
 
  0.838
mll5421
NifS (424 aa)
 
  0.787
mlr0102
Aminotransferase (425 aa)
 
  0.768
mlr0019
ABC transporter ATP-binding protein (251 aa)
 
 
  0.749
mll5617
DnaK (418 aa)
   
 
  0.735
dnaK
DnaK; Acts as a chaperone (638 aa)
   
 
  0.735
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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