STRINGSTRING
mll0969 protein (Mesorhizobium loti) - STRING interaction network
"mll0969" - Transposase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll0969Transposase (185 aa)    
Predicted Functional Partners:
msl0968
Hypothetical protein (63 aa)
 
          0.909
mll6067
Transposase (116 aa)
 
          0.823
mll6001
Transposase (145 aa)
 
          0.821
mll6064
Transposase (160 aa)
   
          0.775
mlr6032
Transposase (335 aa)
   
          0.753
mll5981
Transposase (346 aa)
 
          0.749
mll5981
Transposase (346 aa)
 
          0.749
mll5967
Transposase (264 aa)
   
          0.571
mlr6190
Transposase (381 aa)
   
          0.548
mll5964
Transposase (388 aa)
   
          0.532
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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