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mll1002 protein (Mesorhizobium loti) - STRING interaction network
"mll1002" - Sugar ABC transporter ATP-binding protein in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll1002Sugar ABC transporter ATP-binding protein (262 aa)    
Predicted Functional Partners:
mll1003
Sugar ABC transporter permease (373 aa)
 
  0.993
mll1004
Secreted solute binding protein (316 aa)
  0.978
mlr7626
ABC transporter permease (380 aa)
 
  0.953
mlr2441
Sugar ABC transporter permease (365 aa)
 
  0.936
mlr7625
ABC transporter substrate-binding protein (326 aa)
  0.930
mlr2439
Sugar binding protein of ABC transporter (318 aa)
  0.930
mll1508
Hypothetical protein (335 aa)
 
  0.929
mll1001
Hypothetical protein; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (285 aa)
 
          0.888
mll1000
Dehydrogenase (338 aa)
 
          0.859
mll7365
ABC transporter permease (342 aa)
 
  0.853
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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