STRINGSTRING
mll1018 protein (Mesorhizobium loti) - STRING interaction network
"mll1018" - Racemase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll1018Racemase (405 aa)    
Predicted Functional Partners:
mll1017
3-ketoacyl-ACP reductase (276 aa)
              0.859
mll2878
Glutaryl Co-A dehydrogenase (398 aa)
 
 
  0.803
mll7157
Hypothetical protein (381 aa)
 
          0.758
mll1009
enoyl-CoA hydratase (258 aa)
   
 
  0.754
mll4199
enoyl-CoA hydratase (689 aa)
   
 
  0.745
mll1015
Aldehyde dehydrogenase (495 aa)
   
 
  0.742
mll7619
methylmalonyl-CoA mutase (683 aa)
       
  0.732
mlr5626
acyl-CoA dehydrogenase (408 aa)
 
 
  0.717
mll7145
Monoamine oxidase regulatory protein (148 aa)
 
   
  0.708
mll1016
Sugar ABC transporter ATP-binding protein (497 aa)
         
  0.704
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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