STRINGSTRING
mll1028 protein (Mesorhizobium loti) - STRING interaction network
"mll1028" - RzcA in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll1028RzcA (1018 aa)    
Predicted Functional Partners:
mll1026
RspE (434 aa)
 
     
  0.944
mll1027
RspD (581 aa)
 
   
  0.930
mll2582
Metalloprotease transporter (440 aa)
 
     
  0.779
mlr6772
RspE (447 aa)
 
     
  0.768
mll2583
Metalloprotease transporter (581 aa)
 
   
  0.741
mlr6771
RspD (570 aa)
 
   
  0.715
mlr0589
Secretion protein (468 aa)
 
     
  0.687
mll6750
HlyA protein (495 aa)
   
          0.576
mlr0588
Secretion ATP-binding protein (714 aa)
 
     
  0.550
mlr6405
TrbI (409 aa)
           
  0.430
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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