STRINGSTRING
mll1107 protein (Mesorhizobium loti) - STRING interaction network
"mll1107" - Outer membrane protein, nodT in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll1107Outer membrane protein, nodT (466 aa)    
Predicted Functional Partners:
mll6731
Multidrug efflux membrane fusion protein (402 aa)
 
  0.979
mlr3647
RND efflux membrane fusion protein (465 aa)
 
  0.962
mlr3649
RND efflux transporter (1027 aa)
 
  0.944
mll7356
MexE (384 aa)
 
  0.902
mlr3284
RND efflux membrane fusion protein (376 aa)
   
  0.862
mll5251
ExoF (419 aa)
   
  0.839
mll3833
Hypothetical protein (370 aa)
 
  0.808
mlr2403
RND efflux membrane fusion protein (360 aa)
 
  0.807
mlr1397
ABC transporter permease (405 aa)
   
  0.784
mlr7297
Component of multidrug efflux system (380 aa)
   
  0.773
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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