Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Hypothetical protein (291 aa)
Predicted Functional Partners:
Transcriptional regulator (472 aa)
Phosphatidate cytidylyltransferase (271 aa)
NdvA; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP- binding domain (NBD) is responsible for energy generation (By similarity) (590 aa)
ExsA (631 aa)
ABC transporter ATP-binding protein (633 aa)
ABC transporter ATP-binding protein (568 aa)
ABC-transport protein, ATP-binding protein (627 aa)
ABC-transport protein, ATP-binding protein (631 aa)
ABC transporter ATP-binding protein (617 aa)
ABC transporter ATP-binding protein (613 aa)
Your Current Organism:
NCBI taxonomy Id: 266835 Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti