STRINGSTRING
mll1253 protein (Mesorhizobium loti) - STRING interaction network
"mll1253" - ABC transporter ATP-binding protein in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll1253ABC transporter ATP-binding protein (267 aa)    
Predicted Functional Partners:
mll1254
ABC transporter permease (259 aa)
 
  0.988
mll1256
Hypothetical protein (316 aa)
 
 
  0.984
mlr7112
Hypothetical protein (335 aa)
 
 
  0.952
mlr7114
ABC transporter permease (246 aa)
 
  0.921
mlr4519
Taurine transport system permease (286 aa)
 
  0.900
mlr2858
NrtA (425 aa)
 
  0.894
mlr2856
NrtA (412 aa)
 
  0.892
mll4557
Aliphatic sulfonate transport membrane component (258 aa)
 
  0.873
mll6979
ABC transporter substrate-binding protein (363 aa)
 
  0.870
mlr6799
Hypothetical protein (336 aa)
   
 
  0.836
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
Server load: low (14%) [HD]