STRINGSTRING
mll6001 protein (Mesorhizobium loti) - STRING interaction network
"mll6001" - Transposase in Mesorhizobium loti
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mll6001Transposase (145 aa)    
Predicted Functional Partners:
msl6002
Hypothetical protein (64 aa)
              0.859
mll6006
8-amino-7-oxononanoate synthase (415 aa)
              0.859
mll6005
Dithiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (211 aa)
              0.859
mll6003
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (235 aa)
              0.859
mll0969
Transposase (185 aa)
 
          0.821
mll6068
Transposase (277 aa)
          0.805
mll8741
Hypothetical protein (208 aa)
 
          0.787
mll4023
Transposase (172 aa)
 
          0.785
mlr6032
Transposase (335 aa)
   
          0.775
mll5967
Transposase (264 aa)
   
          0.739
Your Current Organism:
Mesorhizobium loti
NCBI taxonomy Id: 266835
Other names: M. loti, M. loti MAFF303099, Mesorhizobium loti, Mesorhizobium loti MAFF303099, Mesorhizobium loti str. MAFF303099, Mesorhizobium loti strain MAFF303099, Rhizobium loti
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