STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0169Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tfu:Tfu_2140 PAS/protein phosphatase 2C-like. (711 aa)    
Predicted Functional Partners:
Krad_0483
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.862
Krad_0122
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4021 putative sigma factor PP2C-like phosphatases.
  
     0.773
Krad_0170
PFAM: glycosyl transferase family 2; KEGG: tfu:Tfu_3054 glycosyltransferase involved in cell wall biogenesis.
       0.773
Krad_2103
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4755 putative membrane phosphatase.
  
     0.773
Krad_2409
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4755 putative membrane phosphatase.
  
     0.772
Krad_2194
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: nfa:nfa2970 hypothetical protein.
  
     0.770
Krad_0436
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
  
     0.766
Krad_3520
PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ace:Acel_1597 serine phosphatase.
  
     0.715
Krad_0171
KEGG: nca:Noca_0654 hypothetical protein.
       0.674
Krad_0168
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: sco:SCO3975 regulator.
  
 
 0.662
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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