STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_0185Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mlr8380 hypothetical protein. (222 aa)    
Predicted Functional Partners:
Krad_4197
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sma:SAV6651 GntR-family transcriptional regulator.
  
  
 0.776
Krad_0150
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sco:SCO5840 transcriptional regulator.
  
     0.775
Krad_1921
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: art:Arth_0882 transcriptional regulator, GntR family.
  
     0.775
Krad_4211
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rha:RHA1_ro03016 possible transcriptional regulator, GntR family.
  
     0.775
Krad_2145
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: art:Arth_4143 transcriptional regulator, GntR family.
  
     0.774
Krad_0537
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rfr:Rfer_0874 transcriptional regulator, GntR family.
  
     0.772
Krad_2681
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sco:SCO1410 GntR-family transcriptional regulator.
  
     0.767
Krad_4225
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rha:RHA1_ro03477 probable transcriptional regulator, GntR family.
  
     0.750
Krad_4399
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rxy:Rxyl_0554 GntR-like protein.
  
  
 0.738
Krad_0184
PFAM: major facilitator superfamily MFS_1; KEGG: lxx:Lxx14870 sugar transporter.
 
     0.628
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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