Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Krad_2778 | Krad_2779 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5797 tetracenomycin C resistance and export protein. | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cac:CAC3484 short-chain alcohol dehydrogenase family protein. | 0.773 |
Krad_2778 | Krad_2780 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5797 tetracenomycin C resistance and export protein. | TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_5164 zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.511 |
Krad_2779 | Krad_2778 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cac:CAC3484 short-chain alcohol dehydrogenase family protein. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5797 tetracenomycin C resistance and export protein. | 0.773 |
Krad_2779 | Krad_2780 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cac:CAC3484 short-chain alcohol dehydrogenase family protein. | TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_5164 zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.511 |
Krad_2780 | Krad_2778 | TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_5164 zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV5797 tetracenomycin C resistance and export protein. | 0.511 |
Krad_2780 | Krad_2779 | TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_5164 zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cac:CAC3484 short-chain alcohol dehydrogenase family protein. | 0.511 |
Krad_2780 | Krad_2781 | TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_5164 zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | PFAM: Patatin; KEGG: nca:Noca_2085 patatin. | 0.400 |
Krad_2781 | Krad_2780 | PFAM: Patatin; KEGG: nca:Noca_2085 patatin. | TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_5164 zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.400 |