STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krad_3226PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fal:FRAAL2165 CDP-diacylglycerol-inositol 3-phosphatidyltransferase. (238 aa)    
Predicted Functional Partners:
Krad_3064
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aau:AAur_2307 putative CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
  0.972
Krad_1419
PFAM: phosphatidate cytidylyltransferase; KEGG: sco:SCO5628 putative integral membrane protein; Belongs to the CDS family.
    
 0.911
Krad_1485
TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aau:AAur_1589 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
Krad_3101
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sma:SAV6976 putative CDP-diacylglycerol--glycerol-3-phosphat e 3-phosphatidyl-transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.900
Krad_3509
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: aau:AAur_2893 putative myo-inositol-1-phosphate synthase.
 
   
 0.707
Krad_3228
TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: fal:FRAAL2160 phytoene dehydrogenase (phytoene desaturase).
 
   
 0.641
Krad_3227
PFAM: Polyprenyl synthetase; KEGG: art:Arth_1557 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
  
 0.618
Krad_3229
PFAM: Squalene/phytoene synthase; KEGG: fra:Francci3_1383 squalene/phytoene synthase.
  
  
 0.602
Krad_3223
PFAM: protein of unknown function DUF422; KEGG: rha:RHA1_ro01102 possible caratenoid biosynthesis protein.
  
  
 0.411
Your Current Organism:
Kineococcus radiotolerans
NCBI taxonomy Id: 266940
Other names: K. radiotolerans SRS30216 = ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149, Kineococcus radiotolerans ATCC BAA-149 = SRS30216, Kineococcus radiotolerans SRS30216, Kineococcus radiotolerans SRS30216 = ATCC BAA-149, Kineococcus-like str. SRS30216
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