Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Krad_3413 | Krad_4187 | Krad_3413 | Krad_4187 | PFAM: Acetyl xylan esterase; KEGG: art:Arth_3303 acetyl xylan esterase. | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | 0.907 |
Krad_4184 | Krad_4185 | Krad_4184 | Krad_4185 | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: art:Arth_2191 methyltransferase type 11. | Hypothetical protein. | 0.488 |
Krad_4184 | Krad_4187 | Krad_4184 | Krad_4187 | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: art:Arth_2191 methyltransferase type 11. | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | 0.479 |
Krad_4184 | pyrE | Krad_4184 | Krad_4186 | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: art:Arth_2191 methyltransferase type 11. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.500 |
Krad_4185 | Krad_4184 | Krad_4185 | Krad_4184 | Hypothetical protein. | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: art:Arth_2191 methyltransferase type 11. | 0.488 |
Krad_4185 | Krad_4187 | Krad_4185 | Krad_4187 | Hypothetical protein. | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | 0.757 |
Krad_4185 | Krad_4188 | Krad_4185 | Krad_4188 | Hypothetical protein. | PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_4081 putative extracellular solute-binding protein. | 0.508 |
Krad_4185 | Krad_4189 | Krad_4185 | Krad_4189 | Hypothetical protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3031 putative ABC-type sugar transport system, permease component. | 0.508 |
Krad_4185 | Krad_4190 | Krad_4185 | Krad_4190 | Hypothetical protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3032 putative ABC-type sugar transport system, permease component. | 0.508 |
Krad_4185 | Krad_4191 | Krad_4185 | Krad_4191 | Hypothetical protein. | KEGG: nar:Saro_2411 twin-arginine translocation pathway signal. | 0.508 |
Krad_4185 | Krad_4192 | Krad_4185 | Krad_4192 | Hypothetical protein. | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sco:SCO2850 putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase. | 0.508 |
Krad_4185 | Krad_4193 | Krad_4185 | Krad_4193 | Hypothetical protein. | PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: aau:AAur_3801 putative mandelate racemase/muconate lactonizing enzyme. | 0.508 |
Krad_4185 | pyrE | Krad_4185 | Krad_4186 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.773 |
Krad_4187 | Krad_3413 | Krad_4187 | Krad_3413 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | PFAM: Acetyl xylan esterase; KEGG: art:Arth_3303 acetyl xylan esterase. | 0.907 |
Krad_4187 | Krad_4184 | Krad_4187 | Krad_4184 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: art:Arth_2191 methyltransferase type 11. | 0.479 |
Krad_4187 | Krad_4185 | Krad_4187 | Krad_4185 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | Hypothetical protein. | 0.757 |
Krad_4187 | Krad_4188 | Krad_4187 | Krad_4188 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_4081 putative extracellular solute-binding protein. | 0.627 |
Krad_4187 | Krad_4189 | Krad_4187 | Krad_4189 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3031 putative ABC-type sugar transport system, permease component. | 0.521 |
Krad_4187 | Krad_4190 | Krad_4187 | Krad_4190 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_3032 putative ABC-type sugar transport system, permease component. | 0.522 |
Krad_4187 | Krad_4191 | Krad_4187 | Krad_4191 | PFAM: peptidase S15; Acetyl xylan esterase; KEGG: ace:Acel_2045 acetyl xylan esterase. | KEGG: nar:Saro_2411 twin-arginine translocation pathway signal. | 0.540 |
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