STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1863Hypothetical uncharacterised conserved protein ucp030820. (169 aa)    
Predicted Functional Partners:
cysI2
Probable sulfite reductase oxidoreductase protein.
 
  
 0.976
cysI1
Probable sulfite reductase oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.901
cyoA2
Probable transmembrane cytochrome o ubiquinol oxidase (subunit II) oxidoreductase protein.
       0.686
cyoB2
Probable transmembrane cytochrome o ubiquinol oxidase (subunitI oxidoreductase protein; Belongs to the heme-copper respiratory oxidase family.
       0.686
cyoC2
Probable transmembrane cytochrome o ubiquinol oxidase (subunit III) oxidoreductase protein.
       0.686
cyoD2
Probable transmembrane cytochrome o ubiquinol oxidase (subunit iv) oxidoreductase protein.
       0.686
cysH
Probable 5' adenylylsulfate aps reductase protein; Reduction of activated sulfate into sulfite.
 
    0.646
tISRso13
Isrso13-transposase protein.
       0.572
RSc1857
Probable transcriptional regulators containing a dna-binding hth domain and an aminotransferase domain transcription regulator protein.
  
    0.476
cysD
Putative sulfate adenylyltransferase subunit 2 protein.
  
    0.435
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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