STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppB2Probable dipeptide transmembrane abc transporter protein. (328 aa)    
Predicted Functional Partners:
dppC2
Probable dipeptide transmembrane abc transporter protein.
 
 0.990
RSc1382
Probable transmembrane abc transporter protein.
 
 0.982
dppD2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.982
dppF2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 
 0.981
dppA2
Probable periplasmic dipeptide transport protein precursor.
 
 0.970
RSc1379
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.964
dppC1
Probable dipeptide transport system permease transmembrane protein.
 
 0.960
RSc1380
Probable substate-binding periplasmic (pbp) abc transporter protein.
 
 0.939
RSc2006
Probable extracellular solute-binding, family 5 abc transporter protein.
 
 0.934
dppD1
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.925
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.