STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2293Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (526 aa)    
Predicted Functional Partners:
RSp0706
Probable amino-acid composite atp-binding transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.694
RSc2294
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.547
RSc2292
Putative transmembrane protein.
     
 0.531
RSc2295
Hypothetical signal peptide protein.
       0.520
RSc0382
Probable response regulator transcription regulator protein.
  
   0.483
RSc2291
Putative transglycosylase signal peptide protein.
       0.476
RSc2296
Putative transmembrane protein.
       0.444
RSc2297
Hypothetical signal peptide protein.
  
  
 0.437
RSc2298
Putative multicopper oxidase, type 3; signal peptide protein.
  
  
 0.412
RSc2299
Putative multicopper oxidase, type 2; signal peptide protein.
  
    0.405
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.