STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0660Probable porin protein. (273 aa)    
Predicted Functional Partners:
RSc0067
Putative thioredoxin protein.
  
     0.702
RSc0411
Probable transmembrane protein.
  
     0.698
RSc0317
Probable transmembrane protein.
  
     0.691
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
  
     0.660
RSc3094
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.639
RSp0116
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.638
RSc0709
Putative transglycosylase transmembrane protein.
  
     0.621
risS
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ; Probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein.
  
     0.611
RSp1095
Probable activation/secretion signal peptide protein.
  
    0.597
RSc2234
Probable transmembrane protein.
  
     0.596
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.