STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsRPutative arsenical resistance operon repressor transcription regulator protein. (107 aa)    
Predicted Functional Partners:
arsC
Putative arsenate reductase (arsenical pump modifier) protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.939
RSp1127
Probable transmembrane abc transporter protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
   
 0.734
chrB
Probable chromate resistance signal peptide protein.
      
 0.569
cutA
Probable periplasmic divalent cation tolerance protein.
      
 0.568
metR
Putative transcriptional activator metr transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
   
  
 0.544
RSc3271
Putative arsenate reductase oxidoreductase protein.
 
   
 0.508
chrA
Probable chromate transport transmembrane protein.
     
 0.503
pstB
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
 0.480
nosL
Probable nosl lipoprotein.
      
 0.469
rcnA
Putative efflux nickel/cobalt transmembrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
      
 0.460
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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