STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsRPutative arsenical resistance operon repressor transcription regulator protein. (107 aa)    
Predicted Functional Partners:
arsC
Putative arsenate reductase (arsenical pump modifier) protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.924
RSp1127
Probable transmembrane abc transporter protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
   
 0.678
rcnA
Putative efflux nickel/cobalt transmembrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
      
 0.586
copZ
Probable copper ion-binding protein.
     
 0.582
RSc3271
Putative arsenate reductase oxidoreductase protein.
 
   
 0.438
pstC
Probable phosphate transmembrane abc transporter protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.429
pstA
Probable phosphate transmembrane abc transporter protein.
  
  
 0.417
nosL
Probable nosl lipoprotein.
      
 0.417
phoU
Probable phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
     
 0.414
pstS1
Probable phosphate-binding periplasmic (pbp) abc transporter protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
      
 0.404
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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