node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMOB4970 | MMOB4980 | MMOB4970 | MMOB4980 | Expressed protein; Contains EF-hand Ca++ binding domain and zinc protease signature sequence; expression validated by proteogenomic mapping: 22 unique peptides covering 43.9% of sequence. | RNAse G and E associated domain containing protein; COG3557; expression validated by proteogenomic mapping: 4 unique peptides covering 18% of sequence. | 0.670 |
MMOB4970 | trmB | MMOB4970 | MMOB4960 | Expressed protein; Contains EF-hand Ca++ binding domain and zinc protease signature sequence; expression validated by proteogenomic mapping: 22 unique peptides covering 43.9% of sequence. | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.560 |
MMOB4980 | MMOB4970 | MMOB4980 | MMOB4970 | RNAse G and E associated domain containing protein; COG3557; expression validated by proteogenomic mapping: 4 unique peptides covering 18% of sequence. | Expressed protein; Contains EF-hand Ca++ binding domain and zinc protease signature sequence; expression validated by proteogenomic mapping: 22 unique peptides covering 43.9% of sequence. | 0.670 |
MMOB4980 | trmB | MMOB4980 | MMOB4960 | RNAse G and E associated domain containing protein; COG3557; expression validated by proteogenomic mapping: 4 unique peptides covering 18% of sequence. | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.505 |
cspR | trmB | MMOB1210 | MMOB4960 | spoU class tRNA/rRNA methylase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.481 |
cspR | trmU | MMOB1210 | MMOB4400 | spoU class tRNA/rRNA methylase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | tRNA-methyltransferase (5-methylaminomethyl-2-thiouridylate); Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.419 |
gidA | thdF | MMOB1540 | MMOB5620 | Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.997 |
gidA | trmB | MMOB1540 | MMOB4960 | Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.664 |
gidA | trmD | MMOB1540 | MMOB4290 | Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.685 |
gidA | trmU | MMOB1540 | MMOB4400 | Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA-methyltransferase (5-methylaminomethyl-2-thiouridylate); Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.889 |
gidA | truB | MMOB1540 | MMOB4660 | Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.635 |
serS | trmB | MMOB0920 | MMOB4960 | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.634 |
serS | truB | MMOB0920 | MMOB4660 | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.476 |
thdF | gidA | MMOB5620 | MMOB1540 | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Glucose inhibited division protein a; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.997 |
thdF | trmB | MMOB5620 | MMOB4960 | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.586 |
thdF | trmD | MMOB5620 | MMOB4290 | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.572 |
thdF | trmU | MMOB5620 | MMOB4400 | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | tRNA-methyltransferase (5-methylaminomethyl-2-thiouridylate); Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.875 |
thdF | truB | MMOB5620 | MMOB4660 | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.684 |
trmA | trmB | MMOB5020 | MMOB4960 | SAM-dependent methyltransferases; Related to tRNA (uracil-5-)-methyltransferase; COG2265; expression validated by proteogenomic mapping: 5 unique peptides covering 17.9% of sequence; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.530 |
trmB | MMOB4970 | MMOB4960 | MMOB4970 | Predicted S-adenosylmethionine-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Expressed protein; Contains EF-hand Ca++ binding domain and zinc protease signature sequence; expression validated by proteogenomic mapping: 22 unique peptides covering 43.9% of sequence. | 0.560 |