STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_0742Glutamate Aspartate periplasmic binding protein precursor GltI; TCDB 3.A.1.3.4. (337 aa)    
Predicted Functional Partners:
ADINL_0743
Glutamate Aspartate transport system permease protein GltJ; TCDB 3.A.1.3.4.
 
 
 0.998
ADINL_0744
Glutamate Aspartate transport system permease protein GltK; TCDB 3.A.1.3.4.
 
 0.998
ADINL_0745
ABC-type polar amino acid transport system, ATPase component.
 
 0.997
ADINL_0773
Glutamate transport ATP-binding protein.
  
 0.787
ADINL_2097
Glutamine transport ATP-binding protein GlnQ; TCDB 3.A.1.3.2.
  
 0.787
ADINL_2171
Glutamine transport ATP-binding protein GlnQ; TCDB 3.A.1.3.2.
  
 0.787
ADINL_1891
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.767
ADINL_0301
Sensory box histidine kinase/response regulator.
   
 0.740
ADINL_1935
Sensory box histidine kinase/response regulator.
   
 0.740
ADINL_0512
Cyclohexadienyl dehydrogenase; 5-Enolpyruvylshikimate-3-phosphate synthase.
    
 0.730
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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