STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADINL_1146Flavodoxin 2; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (174 aa)    
Predicted Functional Partners:
ADINL_1145
Hypothetical protein.
       0.773
fur
Ferric uptake regulation protein FUR; Belongs to the Fur family.
 
  
 0.682
ADINL_1147
Putative c'cytochrome.
       0.570
ADINL_0297
Chemotaxis protein CheC -- inhibitor of MCP methylation; Overlaps CDS with the same product name.
    
   0.564
ADINL_3101
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.564
ADINL_1052
Translation elongation factor P Lys34:lysine transferase.
 
      0.556
ADINL_2010
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
  0.514
ADINL_3097
Ribonucleotide reductase of class Ia (aerobic), beta subunit.
 
    0.473
ADINL_3124
Sulfite reductase [NADPH] hemoprotein beta-component.
    
 0.455
msrP
Putative sulfite oxidase subunit YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce [...]
  
 
  0.445
Your Current Organism:
Nitrincola lacisaponensis
NCBI taxonomy Id: 267850
Other names: ATCC BAA-920, DSM 16316, N. lacisaponensis, Nitrincola lacisaponensis Dimitriu et al. 2005, strain 4CA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.