STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syc1495_cRNA metabolism-related protein (290 aa)    
Predicted Functional Partners:
dnaN
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as [...]
       0.794
syc1836_d
annotation not available
  
     0.748
syc1307_d
annotation not available
  
     0.746
syc1728_c
annotation not available
  
     0.743
syc0842_c
annotation not available
  
     0.739
syc1494_c
Phosphoribosylformylglycinamidine synthase subunit PurL; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought t [...]
       0.730
syc1705_d
annotation not available
  
     0.717
syc0973_d
annotation not available
  
     0.685
syc2454_d
annotation not available
  
     0.685
syc1687_c
annotation not available
  
     0.674
Your Current Organism:
Synechococcus elongatus PCC6301
NCBI taxonomy Id: 269084
Other names: Cyanobacterium synechococcus, S. elongatus PCC 6301, Synechococcus elongatus PCC 6301, Synechococcus elongatus PCC6301, Synechococcus leopoliensis IAM M-6, Synechococcus nidulans NIVA-CYA 20, Synechococcus sp. (strain TX-20), Synechococcus sp. ATCC 27144, Synechococcus sp. PCC 6301
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