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trmB protein (Burkholderia vietnamiensis) - STRING interaction network
"trmB" - tRNA in Burkholderia vietnamiensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (255 aa)    
Predicted Functional Partners:
ABO55236.1
KEGG- bcn-Bcen_5922 ATP-dependent helicase HrpA; TIGRFAM- ATP-dependent helicase HrpA; PFAM- helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART- AAA ATPase; DEAD-like helicases-like (1394 aa)
 
      0.692
ABO59212.1
KEGG- bxe-Bxe_A1900 hypothetical protein (169 aa)
     
        0.671
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (280 aa)
 
   
  0.660
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (276 aa)
   
   
  0.650
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (310 aa)
   
   
  0.571
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs; Belongs to the RNA methyltransferase TrmD family (264 aa)
     
   
  0.554
ftsJ
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (220 aa)
     
 
  0.545
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (67 aa)
   
   
  0.543
ABO56272.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (494 aa)
   
 
  0.533
ABO55582.1
PFAM- Fmu (Sun) domain protein; KEGG- bam-Bamb_2556 Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (420 aa)
   
 
  0.527
Your Current Organism:
Burkholderia vietnamiensis
NCBI taxonomy Id: 269482
Other names: B. vietnamiensis G4, Burkholderia vietnamiensis, Burkholderia vietnamiensis G4, Burkholderia vietnamiensis str. G4, Burkholderia vietnamiensis strain G4
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