STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4606BQ2448_4606 protein. (516 aa)    
Predicted Functional Partners:
BQ2448_5247
BQ2448_5247 protein.
   
  0.999
BQ2448_1794
BQ2448_1794 protein.
   
 0.998
BQ2448_4580
BQ2448_4580 protein.
   
 0.998
BQ2448_6563
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
BQ2448_5137
BQ2448_5137 protein.
   
 
 0.997
BQ2448_8046
BQ2448_8046 protein.
   
 0.997
BQ2448_6022
BQ2448_6022 protein.
   
  0.996
BQ2448_4255
BQ2448_4255 protein.
   
 0.996
BQ2448_8018
BQ2448_8018 protein.
   
   0.996
BQ2448_3604
BQ2448_3604 protein.
   
  0.995
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.