Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rru_A0521 | Rru_A1398 | Rru_A0521 | Rru_A1398 | CheA Signal Transduction Histidine Kinases (STHK). | Response regulator receiver domain protein (CheY). | 0.946 |
Rru_A0521 | Rru_A1399 | Rru_A0521 | Rru_A1399 | CheA Signal Transduction Histidine Kinases (STHK). | CheA Signal Transduction Histidine Kinases (STHK). | 0.954 |
Rru_A0521 | Rru_A1400 | Rru_A0521 | Rru_A1400 | CheA Signal Transduction Histidine Kinases (STHK). | CheW protein. | 0.995 |
Rru_A0521 | Rru_A1401 | Rru_A0521 | Rru_A1401 | CheA Signal Transduction Histidine Kinases (STHK). | Chemotaxis sensory transducer. | 0.939 |
Rru_A0521 | Rru_A1402 | Rru_A0521 | Rru_A1402 | CheA Signal Transduction Histidine Kinases (STHK). | CheW protein. | 0.995 |
Rru_A0521 | Rru_A1405 | Rru_A0521 | Rru_A1405 | CheA Signal Transduction Histidine Kinases (STHK). | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.828 |
Rru_A0521 | Rru_A2327 | Rru_A0521 | Rru_A2327 | CheA Signal Transduction Histidine Kinases (STHK). | CheA Signal Transduction Histidine Kinases (STHK). | 0.959 |
Rru_A0521 | cheB2 | Rru_A0521 | Rru_A1406 | CheA Signal Transduction Histidine Kinases (STHK). | Two component CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.996 |
Rru_A0521 | cheB3 | Rru_A0521 | Rru_A2323 | CheA Signal Transduction Histidine Kinases (STHK). | Two component CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
Rru_A0521 | cheD | Rru_A0521 | Rru_A1407 | CheA Signal Transduction Histidine Kinases (STHK). | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.883 |
Rru_A1398 | Rru_A0521 | Rru_A1398 | Rru_A0521 | Response regulator receiver domain protein (CheY). | CheA Signal Transduction Histidine Kinases (STHK). | 0.946 |
Rru_A1398 | Rru_A1399 | Rru_A1398 | Rru_A1399 | Response regulator receiver domain protein (CheY). | CheA Signal Transduction Histidine Kinases (STHK). | 0.996 |
Rru_A1398 | Rru_A1400 | Rru_A1398 | Rru_A1400 | Response regulator receiver domain protein (CheY). | CheW protein. | 0.968 |
Rru_A1398 | Rru_A1401 | Rru_A1398 | Rru_A1401 | Response regulator receiver domain protein (CheY). | Chemotaxis sensory transducer. | 0.961 |
Rru_A1398 | Rru_A1402 | Rru_A1398 | Rru_A1402 | Response regulator receiver domain protein (CheY). | CheW protein. | 0.958 |
Rru_A1398 | Rru_A1405 | Rru_A1398 | Rru_A1405 | Response regulator receiver domain protein (CheY). | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.804 |
Rru_A1398 | Rru_A2327 | Rru_A1398 | Rru_A2327 | Response regulator receiver domain protein (CheY). | CheA Signal Transduction Histidine Kinases (STHK). | 0.947 |
Rru_A1398 | cheB2 | Rru_A1398 | Rru_A1406 | Response regulator receiver domain protein (CheY). | Two component CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.863 |
Rru_A1398 | cheD | Rru_A1398 | Rru_A1407 | Response regulator receiver domain protein (CheY). | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.835 |
Rru_A1399 | Rru_A0521 | Rru_A1399 | Rru_A0521 | CheA Signal Transduction Histidine Kinases (STHK). | CheA Signal Transduction Histidine Kinases (STHK). | 0.954 |
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