Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rru_A0151 | Rru_A0684 | Hypothetical protein. | Conserved hypothetical protein. | 0.643 |
Rru_A0151 | Rru_A2193 | Hypothetical protein. | Abc1 protein. | 0.444 |
Rru_A0151 | Rru_A3282 | Hypothetical protein. | Conserved hypothetical protein. | 0.505 |
Rru_A0566 | Rru_A1500 | Conserved hypothetical protein. | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.703 |
Rru_A0566 | Rru_A2193 | Conserved hypothetical protein. | Abc1 protein. | 0.408 |
Rru_A0684 | Rru_A0151 | Conserved hypothetical protein. | Hypothetical protein. | 0.643 |
Rru_A0684 | Rru_A2193 | Conserved hypothetical protein. | Abc1 protein. | 0.502 |
Rru_A0684 | Rru_A3282 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.465 |
Rru_A1045 | Rru_A2193 | Conserved hypothetical protein. | Abc1 protein. | 0.414 |
Rru_A1500 | Rru_A0566 | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Conserved hypothetical protein. | 0.703 |
Rru_A1500 | Rru_A2193 | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Abc1 protein. | 0.490 |
Rru_A1500 | Rru_A2406 | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). | 0.994 |
Rru_A1980 | Rru_A2193 | Protein of unknown function DUF1022. | Abc1 protein. | 0.469 |
Rru_A2192 | Rru_A2193 | Peptidase M3B, oligoendopeptidase-related clade 3. | Abc1 protein. | 0.671 |
Rru_A2192 | Rru_A2194 | Peptidase M3B, oligoendopeptidase-related clade 3. | MaoC-like dehydratase. | 0.431 |
Rru_A2193 | Rru_A0151 | Abc1 protein. | Hypothetical protein. | 0.444 |
Rru_A2193 | Rru_A0566 | Abc1 protein. | Conserved hypothetical protein. | 0.408 |
Rru_A2193 | Rru_A0684 | Abc1 protein. | Conserved hypothetical protein. | 0.502 |
Rru_A2193 | Rru_A1045 | Abc1 protein. | Conserved hypothetical protein. | 0.414 |
Rru_A2193 | Rru_A1500 | Abc1 protein. | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.490 |
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