Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rru_A1683 | Rru_A1956 | Rru_A1683 | Rru_A1956 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Haloacid dehalogenase-like hydrolase. | 0.900 |
| Rru_A1683 | Rru_A2658 | Rru_A1683 | Rru_A2658 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Haloacid dehalogenase-like hydrolase. | 0.935 |
| Rru_A1683 | cbbM | Rru_A1683 | Rru_A2400 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.906 |
| Rru_A1683 | cbbZ | Rru_A1683 | Rru_A3031 | HAD-superfamily hydrolase, subfamily IA, variant 1. | 2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.923 |
| Rru_A1683 | rlp | Rru_A1683 | Rru_A1998 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Catalyzes the conversion of 5-methylthio-D-ribulose 1- phosphate (MTRu-1P) to a 3:1 mixture of 1-methylthioxylulose 5- phosphate (MTXu-5P) and 1-methylthioribulose 5-phosphate (MTRu-5P). Involved in the MTA-isoprenoid shunt of the methionine salvage pathway. Belongs to the RuBisCO large chain family. Type IV subfamily. | 0.906 |
| Rru_A1956 | Rru_A1683 | Rru_A1956 | Rru_A1683 | Haloacid dehalogenase-like hydrolase. | HAD-superfamily hydrolase, subfamily IA, variant 1. | 0.900 |
| Rru_A1956 | Rru_A2658 | Rru_A1956 | Rru_A2658 | Haloacid dehalogenase-like hydrolase. | Haloacid dehalogenase-like hydrolase. | 0.916 |
| Rru_A1956 | cbbM | Rru_A1956 | Rru_A2400 | Haloacid dehalogenase-like hydrolase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.911 |
| Rru_A1956 | cbbZ | Rru_A1956 | Rru_A3031 | Haloacid dehalogenase-like hydrolase. | 2-phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.913 |
| Rru_A1956 | rlp | Rru_A1956 | Rru_A1998 | Haloacid dehalogenase-like hydrolase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Catalyzes the conversion of 5-methylthio-D-ribulose 1- phosphate (MTRu-1P) to a 3:1 mixture of 1-methylthioxylulose 5- phosphate (MTXu-5P) and 1-methylthioribulose 5-phosphate (MTRu-5P). Involved in the MTA-isoprenoid shunt of the methionine salvage pathway. Belongs to the RuBisCO large chain family. Type IV subfamily. | 0.911 |
| Rru_A2056 | Rru_A2420 | Rru_A2056 | Rru_A2420 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Transferase hexapeptide repeat. | 0.881 |
| Rru_A2056 | cbbM | Rru_A2056 | Rru_A2400 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.750 |
| Rru_A2401 | Rru_A2404 | Rru_A2401 | Rru_A2404 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Phosphoribulokinase. | 0.837 |
| Rru_A2401 | cbbM | Rru_A2401 | Rru_A2400 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.744 |
| Rru_A2404 | Rru_A2401 | Rru_A2404 | Rru_A2401 | Phosphoribulokinase. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.837 |
| Rru_A2404 | cbbM | Rru_A2404 | Rru_A2400 | Phosphoribulokinase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.987 |
| Rru_A2404 | rlp | Rru_A2404 | Rru_A1998 | Phosphoribulokinase. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Catalyzes the conversion of 5-methylthio-D-ribulose 1- phosphate (MTRu-1P) to a 3:1 mixture of 1-methylthioxylulose 5- phosphate (MTXu-5P) and 1-methylthioribulose 5-phosphate (MTRu-5P). Involved in the MTA-isoprenoid shunt of the methionine salvage pathway. Belongs to the RuBisCO large chain family. Type IV subfamily. | 0.945 |
| Rru_A2420 | Rru_A2056 | Rru_A2420 | Rru_A2056 | Transferase hexapeptide repeat. | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.881 |
| Rru_A2420 | cbbM | Rru_A2420 | Rru_A2400 | Transferase hexapeptide repeat. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.759 |
| Rru_A2420 | rlp | Rru_A2420 | Rru_A1998 | Transferase hexapeptide repeat. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Catalyzes the conversion of 5-methylthio-D-ribulose 1- phosphate (MTRu-1P) to a 3:1 mixture of 1-methylthioxylulose 5- phosphate (MTXu-5P) and 1-methylthioribulose 5-phosphate (MTRu-5P). Involved in the MTA-isoprenoid shunt of the methionine salvage pathway. Belongs to the RuBisCO large chain family. Type IV subfamily. | 0.759 |
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