STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2977Antenna complex, alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (69 aa)    
Predicted Functional Partners:
Rru_A2974
Photosynthetic reaction centre M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.999
Rru_A2975
Photosynthetic reaction centre protein L subunit; Belongs to the reaction center PufL/M/PsbA/D family.
 
 0.999
Rru_A2976
Antenna complex, alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
Rru_A0617
Photosynthetic reaction center, H-chain.
  
 
 0.997
Rru_A2978
Chlorophyllide reductase subunit Z.
 
   
 0.924
Rru_A2979
Chlorophyllide reductase subunit Y.
 
  
 0.910
Rru_A2981
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide.
 
   
 0.857
Rru_A0624
2-vinyl bacteriochlorophyllide hydratase.
  
   
 0.842
Rru_A2985
Hydroxyneurosporene synthase.
 
     0.812
Rru_A2982
hydroxyneurosporene-O-methyltransferase.
 
     0.782
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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