Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rru_A0563 | Rru_A0584 | Twin-arginine translocation pathway signal. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.973 |
Rru_A0563 | Rru_A1746 | Twin-arginine translocation pathway signal. | Extracellular ligand-binding receptor. | 0.905 |
Rru_A0563 | Rru_A2873 | Twin-arginine translocation pathway signal. | Extracellular ligand-binding receptor. | 0.920 |
Rru_A0563 | Rru_A3303 | Twin-arginine translocation pathway signal. | Amide-urea binding protein. | 0.918 |
Rru_A0563 | Rru_A3304 | Twin-arginine translocation pathway signal. | ABC transporter component. | 0.632 |
Rru_A0563 | Rru_A3305 | Twin-arginine translocation pathway signal. | ABC transporter component. | 0.591 |
Rru_A0563 | Rru_A3306 | Twin-arginine translocation pathway signal. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.666 |
Rru_A0563 | Rru_A3307 | Twin-arginine translocation pathway signal. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.707 |
Rru_A0563 | Rru_A3417 | Twin-arginine translocation pathway signal. | Extracellular ligand-binding receptor. | 0.952 |
Rru_A0563 | Rru_A3506 | Twin-arginine translocation pathway signal. | Putative branched-chain amino acid transport system substrate-binding protein. | 0.929 |
Rru_A0584 | Rru_A0563 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Twin-arginine translocation pathway signal. | 0.973 |
Rru_A0584 | Rru_A1746 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Extracellular ligand-binding receptor. | 0.856 |
Rru_A0584 | Rru_A2873 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Extracellular ligand-binding receptor. | 0.908 |
Rru_A0584 | Rru_A3303 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Amide-urea binding protein. | 0.914 |
Rru_A0584 | Rru_A3304 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter component. | 0.993 |
Rru_A0584 | Rru_A3305 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter component. | 0.935 |
Rru_A0584 | Rru_A3306 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.564 |
Rru_A0584 | Rru_A3307 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.601 |
Rru_A0584 | Rru_A3417 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Extracellular ligand-binding receptor. | 0.946 |
Rru_A0584 | Rru_A3506 | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | Putative branched-chain amino acid transport system substrate-binding protein. | 0.876 |
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