node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RpsA | Rru_A0015 | Rru_A0293 | Rru_A0015 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 3'-5' exonuclease. | 0.953 |
RpsA | Rru_A2365 | Rru_A0293 | Rru_A2365 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | ATP-dependent helicase HrpB. | 0.962 |
RpsA | rnd | Rru_A0293 | Rru_A2073 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.961 |
RpsA | rnr | Rru_A0293 | Rru_A3203 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.655 |
RpsA | rph | Rru_A0293 | Rru_A3641 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.870 |
RpsA | rpsD | Rru_A0293 | Rru_A0701 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
RpsA | rpsK | Rru_A0293 | Rru_A2665 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
Rru_A0015 | RpsA | Rru_A0015 | Rru_A0293 | 3'-5' exonuclease. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.953 |
Rru_A0015 | Rru_A2365 | Rru_A0015 | Rru_A2365 | 3'-5' exonuclease. | ATP-dependent helicase HrpB. | 0.902 |
Rru_A0015 | rnr | Rru_A0015 | Rru_A3203 | 3'-5' exonuclease. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.866 |
Rru_A0015 | rph | Rru_A0015 | Rru_A3641 | 3'-5' exonuclease. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.963 |
Rru_A0015 | rpsD | Rru_A0015 | Rru_A0701 | 3'-5' exonuclease. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.930 |
Rru_A0015 | rpsK | Rru_A0015 | Rru_A2665 | 3'-5' exonuclease. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.924 |
Rru_A2365 | RpsA | Rru_A2365 | Rru_A0293 | ATP-dependent helicase HrpB. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.962 |
Rru_A2365 | Rru_A0015 | Rru_A2365 | Rru_A0015 | ATP-dependent helicase HrpB. | 3'-5' exonuclease. | 0.902 |
Rru_A2365 | rnd | Rru_A2365 | Rru_A2073 | ATP-dependent helicase HrpB. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.922 |
Rru_A2365 | rnr | Rru_A2365 | Rru_A3203 | ATP-dependent helicase HrpB. | RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.408 |
Rru_A2365 | rph | Rru_A2365 | Rru_A3641 | ATP-dependent helicase HrpB. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.856 |
Rru_A2365 | rpsD | Rru_A2365 | Rru_A0701 | ATP-dependent helicase HrpB. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.948 |
Rru_A2365 | rpsK | Rru_A2365 | Rru_A2665 | ATP-dependent helicase HrpB. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.934 |