STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ69532.1Acyl carrier protein synthase; Belongs to the thiolase-like superfamily. UPF0219 family. (349 aa)    
Predicted Functional Partners:
AAZ69530.1
Conserved hypothetical protein.
 
 
 0.999
AAZ69531.1
acetyl-CoA acyltransferase.
 
 0.999
AAZ70907.1
hydroxymethylglutaryl-CoA reductase (NADPH); Belongs to the HMG-CoA reductase family.
 
 0.999
AAZ69533.1
Transcriptional regulator, XRE family.
 
    0.964
porC
Pyruvate ferredoxin oxidoreductase, gamma subunit.
    
 0.920
porB
Pyruvate ferredoxin oxidoreductase, beta subunit.
     
 0.906
AAZ71141.1
2-oxoacid ferredoxin oxidoreductase, subunit beta.
     
 0.906
AAZ72064.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
     
 0.906
porA
Pyruvate ferredoxin oxidoreductase, alpha subunit.
    
  0.900
porD
Pyruvate ferredoxin oxidoreductase, delta subunit.
    
  0.900
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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