STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ69942.1Conserved hypothetical protein. (390 aa)    
Predicted Functional Partners:
AAZ70801.1
Conserved hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family.
 
     0.844
AAZ70102.1
Conserved hypothetical protein.
  
     0.609
AAZ70065.1
Conserved hypothetical protein.
  
     0.595
AAZ69937.1
Conserved hypothetical protein.
 
     0.585
AAZ69045.1
Hypothetical protein.
  
     0.583
AAZ70728.1
AAA family ATPase.
  
     0.537
AAZ70114.1
CAAX amino terminal protease family protein.
  
     0.536
AAZ71708.1
Transcriptional regulator, AsnC family.
  
     0.525
AAZ71157.1
Conserved hypothetical protein.
  
     0.523
AAZ70718.1
Replicative DNA polymerase I.
 
    0.521
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.